Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sox1P53783 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.39□□□□□ -0.43
Sox1P53783 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox1P53783 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.38□□□□□ -0.43
Sox1P53783 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sox1P53783 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Sox1P53783 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.38□□□□□ -0.43
Sox1P53783 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12.38□□□□□ -0.43
Sox1P53783 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC12.38□□□□□ -0.43
Sox1P53783 Gm23400-201ENSMUST00000174994 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm26463-201ENSMUST00000175065 101 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm24332-201ENSMUST00000175102 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm25959-201ENSMUST00000175112 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm22475-201ENSMUST00000175169 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm22903-201ENSMUST00000175193 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm25070-201ENSMUST00000175237 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm24159-201ENSMUST00000175264 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm25299-201ENSMUST00000175283 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm23798-201ENSMUST00000175560 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm23802-201ENSMUST00000175565 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm25708-201ENSMUST00000177687 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm24370-201ENSMUST00000178007 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm23049-201ENSMUST00000178068 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm28019-201ENSMUST00000178138 101 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm25571-201ENSMUST00000178322 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm25355-201ENSMUST00000178456 101 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm24975-201ENSMUST00000178492 101 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm23189-201ENSMUST00000178954 102 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm25100-201ENSMUST00000179750 101 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm23064-201ENSMUST00000179866 101 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm5714-201ENSMUST00000197343 566 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm18561-201ENSMUST00000206027 804 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.38□□□□□ -0.43
Sox1P53783 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sox1P53783 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sox1P53783 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox1P53783 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox1P53783 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sox1P53783 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sox1P53783 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.37□□□□□ -0.43
Sox1P53783 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sox1P53783 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox1P53783 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Sox1P53783 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Sox1P53783 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.37□□□□□ -0.43
Sox1P53783 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Gm7211-201ENSMUST00000172692 1118 ntBASIC12.37□□□□□ -0.43
Sox1P53783 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.37□□□□□ -0.43
Sox1P53783 Gm36991-201ENSMUST00000191800 648 ntBASIC12.37□□□□□ -0.43
Sox1P53783 Gm6423-201ENSMUST00000204315 934 ntBASIC12.37□□□□□ -0.43
Sox1P53783 Gm18123-201ENSMUST00000210874 822 ntBASIC12.37□□□□□ -0.43
Sox1P53783 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox1P53783 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.37□□□□□ -0.43
Sox1P53783 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.37□□□□□ -0.43
Sox1P53783 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sox1P53783 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sox1P53783 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms