Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SqleP52019 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SqleP52019 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SqleP52019 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SqleP52019 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SqleP52019 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.14□□□□□ -0.31
SqleP52019 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SqleP52019 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SqleP52019 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SqleP52019 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.14□□□□□ -0.31
SqleP52019 Gm23272-201ENSMUST00000104053 129 ntBASIC13.14□□□□□ -0.31
SqleP52019 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.14□□□□□ -0.31
SqleP52019 Gm14270-201ENSMUST00000118388 846 ntBASIC13.14□□□□□ -0.31
SqleP52019 Gm7150-201ENSMUST00000122032 981 ntBASIC13.14□□□□□ -0.31
SqleP52019 Gm24248-201ENSMUST00000157321 322 ntBASIC13.14□□□□□ -0.31
SqleP52019 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.14□□□□□ -0.31
SqleP52019 Gm44315-201ENSMUST00000203041 219 ntBASIC13.14□□□□□ -0.31
SqleP52019 BC106175-202ENSMUST00000219344 1213 ntBASIC13.14□□□□□ -0.31
SqleP52019 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SqleP52019 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SqleP52019 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SqleP52019 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SqleP52019 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SqleP52019 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SqleP52019 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.14□□□□□ -0.31
SqleP52019 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.14□□□□□ -0.31
SqleP52019 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.14□□□□□ -0.31
SqleP52019 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.14□□□□□ -0.31
SqleP52019 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.14□□□□□ -0.31
SqleP52019 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SqleP52019 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SqleP52019 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SqleP52019 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
SqleP52019 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SqleP52019 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SqleP52019 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SqleP52019 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.13□□□□□ -0.31
SqleP52019 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SqleP52019 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SqleP52019 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Gm12419-201ENSMUST00000116649 636 ntBASIC13.13□□□□□ -0.31
SqleP52019 Gm11560-201ENSMUST00000117567 948 ntBASIC13.13□□□□□ -0.31
SqleP52019 Gm5419-201ENSMUST00000119301 527 ntBASIC13.13□□□□□ -0.31
SqleP52019 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.13□□□□□ -0.31
SqleP52019 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Gm6423-201ENSMUST00000204315 934 ntBASIC13.13□□□□□ -0.31
SqleP52019 Gm29763-201ENSMUST00000205306 616 ntBASIC13.13□□□□□ -0.31
SqleP52019 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
SqleP52019 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.13□□□□□ -0.31
SqleP52019 Gm14005-208ENSMUST00000223654 681 ntBASIC13.13□□□□□ -0.31
SqleP52019 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.13□□□□□ -0.31
SqleP52019 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SqleP52019 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
SqleP52019 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
SqleP52019 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SqleP52019 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SqleP52019 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SqleP52019 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SqleP52019 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SqleP52019 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SqleP52019 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SqleP52019 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.12□□□□□ -0.31
SqleP52019 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SqleP52019 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SqleP52019 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SqleP52019 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SqleP52019 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SqleP52019 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SqleP52019 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
SqleP52019 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SqleP52019 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SqleP52019 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SqleP52019 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SqleP52019 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.12□□□□□ -0.31
SqleP52019 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SqleP52019 Gm13019-201ENSMUST00000120000 276 ntBASIC13.12□□□□□ -0.31
SqleP52019 Gm14993-201ENSMUST00000121180 164 ntBASIC13.12□□□□□ -0.31
SqleP52019 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms