Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rfx3P48381 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.97□□□□□ -0.65
Rfx3P48381 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rfx3P48381 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rfx3P48381 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rfx3P48381 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rfx3P48381 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Rfx3P48381 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rfx3P48381 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.96□□□□□ -0.65
Rfx3P48381 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.96□□□□□ -0.65
Rfx3P48381 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Rfx3P48381 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.96□□□□□ -0.65
Rfx3P48381 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.96□□□□□ -0.65
Rfx3P48381 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Rfx3P48381 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.96□□□□□ -0.65
Rfx3P48381 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Rfx3P48381 Gm24136-201ENSMUST00000083374 165 ntBASIC10.96□□□□□ -0.65
Rfx3P48381 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Rfx3P48381 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rfx3P48381 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Rfx3P48381 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Rfx3P48381 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rfx3P48381 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.96□□□□□ -0.66
Rfx3P48381 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.96□□□□□ -0.66
Rfx3P48381 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rfx3P48381 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rfx3P48381 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Rfx3P48381 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.95□□□□□ -0.66
Rfx3P48381 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.95□□□□□ -0.66
Rfx3P48381 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.95□□□□□ -0.66
Rfx3P48381 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.95□□□□□ -0.66
Rfx3P48381 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.95□□□□□ -0.66
Rfx3P48381 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.95□□□□□ -0.66
Rfx3P48381 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.95□□□□□ -0.66
Rfx3P48381 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Rfx3P48381 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rfx3P48381 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Gm13315-201ENSMUST00000120376 991 ntBASIC10.95□□□□□ -0.66
Rfx3P48381 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.95□□□□□ -0.66
Rfx3P48381 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.95□□□□□ -0.66
Rfx3P48381 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Gm27243-201ENSMUST00000183964 521 ntBASIC10.95□□□□□ -0.66
Rfx3P48381 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.95□□□□□ -0.66
Rfx3P48381 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.95□□□□□ -0.66
Rfx3P48381 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.95□□□□□ -0.66
Rfx3P48381 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Rfx3P48381 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.95□□□□□ -0.66
Rfx3P48381 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms