Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox18P43680 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.83□□□□□ -0.52
Sox18P43680 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Sox18P43680 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sox18P43680 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox18P43680 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sox18P43680 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sox18P43680 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.82□□□□□ -0.52
Sox18P43680 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sox18P43680 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sox18P43680 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Gm24891-201ENSMUST00000104391 136 ntBASIC11.82□□□□□ -0.52
Sox18P43680 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Sox18P43680 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Sox18P43680 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.82□□□□□ -0.52
Sox18P43680 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.82□□□□□ -0.52
Sox18P43680 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sox18P43680 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC11.82□□□□□ -0.52
Sox18P43680 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.82□□□□□ -0.52
Sox18P43680 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Gm42732-201ENSMUST00000202887 1197 ntBASIC11.82□□□□□ -0.52
Sox18P43680 Gm43962-201ENSMUST00000203898 190 ntBASIC11.82□□□□□ -0.52
Sox18P43680 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC11.82□□□□□ -0.52
Sox18P43680 Gm45399-201ENSMUST00000209955 1016 ntBASIC11.82□□□□□ -0.52
Sox18P43680 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.82□□□□□ -0.52
Sox18P43680 AC154441.1-201ENSMUST00000223653 1006 ntBASIC11.82□□□□□ -0.52
Sox18P43680 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Gm8325-201ENSMUST00000099086 453 ntBASIC11.82□□□□□ -0.52
Sox18P43680 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Clec12b-202ENSMUST00000112082 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sox18P43680 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sox18P43680 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox18P43680 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Sox18P43680 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.81□□□□□ -0.52
Sox18P43680 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sox18P43680 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sox18P43680 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox18P43680 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.81□□□□□ -0.52
Sox18P43680 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Gm23596-201ENSMUST00000104304 132 ntBASIC11.81□□□□□ -0.52
Sox18P43680 Gm11801-201ENSMUST00000117807 746 ntBASIC11.81□□□□□ -0.52
Sox18P43680 Gm16044-201ENSMUST00000118475 450 ntBASIC11.81□□□□□ -0.52
Sox18P43680 Gm12899-201ENSMUST00000120565 551 ntBASIC11.81□□□□□ -0.52
Sox18P43680 Gm12516-201ENSMUST00000120819 385 ntBASIC11.81□□□□□ -0.52
Sox18P43680 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.81□□□□□ -0.52
Sox18P43680 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC11.81□□□□□ -0.52
Sox18P43680 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Sox18P43680 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sox18P43680 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sox18P43680 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC11.81□□□□□ -0.52
Sox18P43680 Gm18717-201ENSMUST00000192744 1241 ntBASIC11.81□□□□□ -0.52
Sox18P43680 Gm7902-201ENSMUST00000198842 947 ntBASIC11.81□□□□□ -0.52
Sox18P43680 Gm17831-201ENSMUST00000205579 900 ntBASIC11.81□□□□□ -0.52
Sox18P43680 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.81□□□□□ -0.52
Sox18P43680 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.81□□□□□ -0.52
Sox18P43680 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.81□□□□□ -0.52
Sox18P43680 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.81□□□□□ -0.52
Sox18P43680 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms