Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC8.16□□□□□ -1.1
Rpl28P41105 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC8.16□□□□□ -1.1
Rpl28P41105 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC8.16□□□□□ -1.1
Rpl28P41105 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC8.16□□□□□ -1.1
Rpl28P41105 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC8.16□□□□□ -1.1
Rpl28P41105 AL645783.1-201ENSMUST00000221416 1832 ntBASIC8.16□□□□□ -1.1
Rpl28P41105 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Rpl28P41105 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 n-R5s77-201ENSMUST00000083757 119 ntBASIC8.16□□□□□ -1.1
Rpl28P41105 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Rpl28P41105 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC8.16□□□□□ -1.1
Rpl28P41105 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC8.15□□□□□ -1.1
Rpl28P41105 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
Rpl28P41105 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC8.15□□□□□ -1.1
Rpl28P41105 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Rpl28P41105 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 AC124433.1-202ENSMUST00000224762 1535 ntBASIC8.15□□□□□ -1.1
Rpl28P41105 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Gm44913-201ENSMUST00000208060 2990 ntBASIC8.15□□□□□ -1.1
Rpl28P41105 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
Rpl28P41105 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Gm7537-201ENSMUST00000221660 1414 ntBASIC8.15□□□□□ -1.1
Rpl28P41105 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Rpl28P41105 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC8.15□□□□□ -1.1
Rpl28P41105 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC8.15□□□□□ -1.1
Rpl28P41105 Gm12490-201ENSMUST00000120255 560 ntBASIC8.15□□□□□ -1.1
Rpl28P41105 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC8.15□□□□□ -1.1
Rpl28P41105 Gm10156-201ENSMUST00000122364 462 ntBASIC8.15□□□□□ -1.1
Rpl28P41105 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC8.15□□□□□ -1.1
Rpl28P41105 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Rpl28P41105 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC8.15□□□□□ -1.1
Rpl28P41105 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Rpl28P41105 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Gm42929-201ENSMUST00000198374 1286 ntBASIC8.15□□□□□ -1.1
Rpl28P41105 Gm44799-201ENSMUST00000207639 1202 ntBASIC8.15□□□□□ -1.1
Rpl28P41105 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC8.15□□□□□ -1.1
Rpl28P41105 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl28P41105 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
Rpl28P41105 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rpl28P41105 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC8.15□□□□□ -1.11
Rpl28P41105 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Rpl28P41105 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC8.15□□□□□ -1.11
Rpl28P41105 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rpl28P41105 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rpl28P41105 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Rpl28P41105 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rpl28P41105 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Rpl28P41105 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rpl28P41105 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.11
Rpl28P41105 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rpl28P41105 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rpl28P41105 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rpl28P41105 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl28P41105 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms