Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.75□□□□□ -0.53
TfamP40630 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TfamP40630 Gm37008-201ENSMUST00000195712 319 ntBASIC11.75□□□□□ -0.53
TfamP40630 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TfamP40630 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TfamP40630 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.75□□□□□ -0.53
TfamP40630 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TfamP40630 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
TfamP40630 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TfamP40630 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TfamP40630 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TfamP40630 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
TfamP40630 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.75□□□□□ -0.53
TfamP40630 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TfamP40630 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
TfamP40630 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
TfamP40630 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TfamP40630 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.75□□□□□ -0.53
TfamP40630 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.75□□□□□ -0.53
TfamP40630 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TfamP40630 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TfamP40630 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
TfamP40630 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TfamP40630 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
TfamP40630 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
TfamP40630 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TfamP40630 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.74□□□□□ -0.53
TfamP40630 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.74□□□□□ -0.53
TfamP40630 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
TfamP40630 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Gm13875-201ENSMUST00000120162 282 ntBASIC11.74□□□□□ -0.53
TfamP40630 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TfamP40630 Gm13316-201ENSMUST00000140537 691 ntBASIC11.74□□□□□ -0.53
TfamP40630 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.74□□□□□ -0.53
TfamP40630 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.74□□□□□ -0.53
TfamP40630 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.74□□□□□ -0.53
TfamP40630 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.74□□□□□ -0.53
TfamP40630 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TfamP40630 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.74□□□□□ -0.53
TfamP40630 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
TfamP40630 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
TfamP40630 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
TfamP40630 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.74□□□□□ -0.53
TfamP40630 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
TfamP40630 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
TfamP40630 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TfamP40630 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
TfamP40630 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
TfamP40630 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Gm13829-201ENSMUST00000119600 138 ntBASIC11.73□□□□□ -0.53
TfamP40630 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.73□□□□□ -0.53
TfamP40630 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Gm27514-201ENSMUST00000183692 110 ntBASIC11.73□□□□□ -0.53
TfamP40630 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.73□□□□□ -0.53
TfamP40630 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.73□□□□□ -0.53
TfamP40630 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms