Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl12P40224 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl12P40224 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl12P40224 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl12P40224 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cxcl12P40224 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.44□□□□□ -0.42
Cxcl12P40224 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.44□□□□□ -0.42
Cxcl12P40224 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Cxcl12P40224 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cxcl12P40224 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.44□□□□□ -0.42
Cxcl12P40224 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Cxcl12P40224 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.44□□□□□ -0.42
Cxcl12P40224 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cxcl12P40224 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Gm14270-201ENSMUST00000118388 846 ntBASIC12.44□□□□□ -0.42
Cxcl12P40224 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cxcl12P40224 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Gm8723-201ENSMUST00000166076 820 ntBASIC12.44□□□□□ -0.42
Cxcl12P40224 Gm8701-201ENSMUST00000169259 874 ntBASIC12.44□□□□□ -0.42
Cxcl12P40224 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cxcl12P40224 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.44□□□□□ -0.42
Cxcl12P40224 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.44□□□□□ -0.42
Cxcl12P40224 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cxcl12P40224 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cxcl12P40224 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.44□□□□□ -0.42
Cxcl12P40224 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.44□□□□□ -0.42
Cxcl12P40224 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl12P40224 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.43□□□□□ -0.42
Cxcl12P40224 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Cxcl12P40224 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cxcl12P40224 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Gm42816-201ENSMUST00000198433 325 ntBASIC12.43□□□□□ -0.42
Cxcl12P40224 Gm8574-201ENSMUST00000203207 924 ntBASIC12.43□□□□□ -0.42
Cxcl12P40224 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.43□□□□□ -0.42
Cxcl12P40224 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cxcl12P40224 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Cxcl12P40224 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cxcl12P40224 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcl12P40224 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cxcl12P40224 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cxcl12P40224 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cxcl12P40224 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.42□□□□□ -0.42
Cxcl12P40224 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cxcl12P40224 Gm15003-201ENSMUST00000118884 446 ntBASIC12.42□□□□□ -0.42
Cxcl12P40224 Gm9089-201ENSMUST00000122027 526 ntBASIC12.42□□□□□ -0.42
Cxcl12P40224 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Gm9136-201ENSMUST00000193368 454 ntBASIC12.42□□□□□ -0.42
Cxcl12P40224 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Cxcl12P40224 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.42□□□□□ -0.42
Cxcl12P40224 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.42□□□□□ -0.42
Cxcl12P40224 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.42□□□□□ -0.42
Cxcl12P40224 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cxcl12P40224 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Gm26035-201ENSMUST00000083065 308 ntBASIC12.42□□□□□ -0.42
Cxcl12P40224 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cxcl12P40224 Olfr584-201ENSMUST00000098210 964 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms