Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Timp3P39876 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC9.99□□□□□ -0.81
Timp3P39876 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.99□□□□□ -0.81
Timp3P39876 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.99□□□□□ -0.81
Timp3P39876 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.99□□□□□ -0.81
Timp3P39876 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.99□□□□□ -0.81
Timp3P39876 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Timp3P39876 Gm12314-201ENSMUST00000118104 538 ntBASIC9.99□□□□□ -0.81
Timp3P39876 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.99□□□□□ -0.81
Timp3P39876 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Gm24990-201ENSMUST00000157406 323 ntBASIC9.99□□□□□ -0.81
Timp3P39876 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Timp3P39876 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC9.99□□□□□ -0.81
Timp3P39876 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Gm2260-201ENSMUST00000184965 657 ntBASIC9.99□□□□□ -0.81
Timp3P39876 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.99□□□□□ -0.81
Timp3P39876 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.99□□□□□ -0.81
Timp3P39876 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC9.99□□□□□ -0.81
Timp3P39876 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC9.99□□□□□ -0.81
Timp3P39876 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Timp3P39876 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Timp3P39876 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.99□□□□□ -0.81
Timp3P39876 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Timp3P39876 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Timp3P39876 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Timp3P39876 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Timp3P39876 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Timp3P39876 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.98□□□□□ -0.81
Timp3P39876 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.98□□□□□ -0.81
Timp3P39876 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Timp3P39876 Gm16505-201ENSMUST00000179981 232 ntBASIC9.98□□□□□ -0.81
Timp3P39876 Gm28882-201ENSMUST00000185504 314 ntBASIC9.98□□□□□ -0.81
Timp3P39876 Rprl1-202ENSMUST00000198476 238 ntBASIC9.98□□□□□ -0.81
Timp3P39876 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Gm18753-201ENSMUST00000201000 566 ntBASIC9.98□□□□□ -0.81
Timp3P39876 Gm44124-201ENSMUST00000204159 472 ntBASIC9.98□□□□□ -0.81
Timp3P39876 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.98□□□□□ -0.81
Timp3P39876 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.98□□□□□ -0.81
Timp3P39876 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.98□□□□□ -0.81
Timp3P39876 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.98□□□□□ -0.81
Timp3P39876 Gm10076-201ENSMUST00000073238 384 ntBASIC9.98□□□□□ -0.81
Timp3P39876 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC9.98□□□□□ -0.81
Timp3P39876 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.98□□□□□ -0.81
Timp3P39876 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.98□□□□□ -0.81
Timp3P39876 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.98□□□□□ -0.81
Timp3P39876 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.98□□□□□ -0.81
Timp3P39876 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms