Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.01□□□□□ -0.81
Cdkn1aP39689 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Cdkn1aP39689 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.01□□□□□ -0.81
Cdkn1aP39689 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.01□□□□□ -0.81
Cdkn1aP39689 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.01□□□□□ -0.81
Cdkn1aP39689 Gm4607-201ENSMUST00000206649 577 ntBASIC10.01□□□□□ -0.81
Cdkn1aP39689 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Cdkn1aP39689 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.01□□□□□ -0.81
Cdkn1aP39689 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Cdkn1aP39689 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10□□□□□ -0.81
Cdkn1aP39689 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10□□□□□ -0.81
Cdkn1aP39689 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10□□□□□ -0.81
Cdkn1aP39689 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10□□□□□ -0.81
Cdkn1aP39689 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10□□□□□ -0.81
Cdkn1aP39689 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10□□□□□ -0.81
Cdkn1aP39689 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10□□□□□ -0.81
Cdkn1aP39689 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10□□□□□ -0.81
Cdkn1aP39689 Gm18734-201ENSMUST00000172937 808 ntBASIC10□□□□□ -0.81
Cdkn1aP39689 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Gm5732-201ENSMUST00000182596 1007 ntBASIC10□□□□□ -0.81
Cdkn1aP39689 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10□□□□□ -0.81
Cdkn1aP39689 Gm43184-201ENSMUST00000197247 542 ntBASIC10□□□□□ -0.81
Cdkn1aP39689 AU022133-201ENSMUST00000200601 873 ntBASIC10□□□□□ -0.81
Cdkn1aP39689 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10□□□□□ -0.81
Cdkn1aP39689 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Cdkn1aP39689 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10□□□□□ -0.81
Cdkn1aP39689 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Gm5780-201ENSMUST00000217774 1834 ntBASIC10□□□□□ -0.81
Cdkn1aP39689 Rnf17-202ENSMUST00000223627 2077 ntBASIC10□□□□□ -0.81
Cdkn1aP39689 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10□□□□□ -0.81
Cdkn1aP39689 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Cdkn1aP39689 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cdkn1aP39689 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cdkn1aP39689 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Cdkn1aP39689 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Cdkn1aP39689 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Cdkn1aP39689 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Cdkn1aP39689 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cdkn1aP39689 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cdkn1aP39689 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Cdkn1aP39689 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cdkn1aP39689 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.99□□□□□ -0.81
Cdkn1aP39689 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cdkn1aP39689 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cdkn1aP39689 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Cdkn1aP39689 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms