Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.64□□□□□ -0.55
Cdh4P39038 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdh4P39038 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.64□□□□□ -0.55
Cdh4P39038 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.64□□□□□ -0.55
Cdh4P39038 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdh4P39038 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.64□□□□□ -0.55
Cdh4P39038 Gm4034-201ENSMUST00000187674 480 ntBASIC11.64□□□□□ -0.55
Cdh4P39038 Gm4857-201ENSMUST00000192718 785 ntBASIC11.64□□□□□ -0.55
Cdh4P39038 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.64□□□□□ -0.55
Cdh4P39038 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdh4P39038 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdh4P39038 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.64□□□□□ -0.55
Cdh4P39038 Gm19994-201ENSMUST00000217086 586 ntBASIC11.64□□□□□ -0.55
Cdh4P39038 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.64□□□□□ -0.55
Cdh4P39038 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Cdh4P39038 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.64□□□□□ -0.55
Cdh4P39038 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cdh4P39038 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cdh4P39038 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdh4P39038 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cdh4P39038 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdh4P39038 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.63□□□□□ -0.55
Cdh4P39038 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cdh4P39038 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Cdh4P39038 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.63□□□□□ -0.55
Cdh4P39038 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.63□□□□□ -0.55
Cdh4P39038 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cdh4P39038 Gm13296-201ENSMUST00000117854 997 ntBASIC11.63□□□□□ -0.55
Cdh4P39038 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.63□□□□□ -0.55
Cdh4P39038 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.63□□□□□ -0.55
Cdh4P39038 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.63□□□□□ -0.55
Cdh4P39038 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.63□□□□□ -0.55
Cdh4P39038 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.63□□□□□ -0.55
Cdh4P39038 Gm45598-202ENSMUST00000210719 986 ntBASIC11.63□□□□□ -0.55
Cdh4P39038 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.63□□□□□ -0.55
Cdh4P39038 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cdh4P39038 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cdh4P39038 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.63□□□□□ -0.55
Cdh4P39038 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cdh4P39038 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cdh4P39038 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cdh4P39038 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.63□□□□□ -0.55
Cdh4P39038 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.63□□□□□ -0.55
Cdh4P39038 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.63□□□□□ -0.55
Cdh4P39038 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh4P39038 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms