Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Upk2P38575 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.63□□□□□ -0.71
Upk2P38575 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Upk2P38575 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.63□□□□□ -0.71
Upk2P38575 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Upk2P38575 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Upk2P38575 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Upk2P38575 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Upk2P38575 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Upk2P38575 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.62□□□□□ -0.71
Upk2P38575 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.62□□□□□ -0.71
Upk2P38575 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.62□□□□□ -0.71
Upk2P38575 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.62□□□□□ -0.71
Upk2P38575 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.62□□□□□ -0.71
Upk2P38575 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.62□□□□□ -0.71
Upk2P38575 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.62□□□□□ -0.71
Upk2P38575 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.62□□□□□ -0.71
Upk2P38575 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.62□□□□□ -0.71
Upk2P38575 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Upk2P38575 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Upk2P38575 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.62□□□□□ -0.71
Upk2P38575 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Upk2P38575 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Upk2P38575 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.62□□□□□ -0.71
Upk2P38575 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.62□□□□□ -0.71
Upk2P38575 Gm6334-201ENSMUST00000207083 228 ntBASIC10.62□□□□□ -0.71
Upk2P38575 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.62□□□□□ -0.71
Upk2P38575 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.62□□□□□ -0.71
Upk2P38575 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Upk2P38575 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Upk2P38575 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.61□□□□□ -0.71
Upk2P38575 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Upk2P38575 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Upk2P38575 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.61□□□□□ -0.71
Upk2P38575 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.61□□□□□ -0.71
Upk2P38575 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Upk2P38575 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Upk2P38575 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Upk2P38575 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.61□□□□□ -0.71
Upk2P38575 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.61□□□□□ -0.71
Upk2P38575 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.61□□□□□ -0.71
Upk2P38575 Gm38241-201ENSMUST00000192641 898 ntBASIC10.61□□□□□ -0.71
Upk2P38575 Gm38266-201ENSMUST00000194931 421 ntBASIC10.61□□□□□ -0.71
Upk2P38575 Gm43630-201ENSMUST00000201550 776 ntBASIC10.61□□□□□ -0.71
Upk2P38575 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Upk2P38575 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Gm45865-201ENSMUST00000211815 945 ntBASIC10.61□□□□□ -0.71
Upk2P38575 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.61□□□□□ -0.71
Upk2P38575 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Upk2P38575 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms