Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rfc1P35601 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rfc1P35601 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfc1P35601 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rfc1P35601 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.78□□□□□ -0.36
Rfc1P35601 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.78□□□□□ -0.36
Rfc1P35601 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rfc1P35601 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.78□□□□□ -0.36
Rfc1P35601 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rfc1P35601 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc1P35601 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rfc1P35601 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.78□□□□□ -0.36
Rfc1P35601 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rfc1P35601 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfc1P35601 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfc1P35601 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Rfc1P35601 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfc1P35601 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfc1P35601 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Rfc1P35601 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Rfc1P35601 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.77□□□□□ -0.37
Rfc1P35601 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.77□□□□□ -0.37
Rfc1P35601 Gm28693-202ENSMUST00000190758 331 ntBASIC12.77□□□□□ -0.37
Rfc1P35601 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.77□□□□□ -0.37
Rfc1P35601 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.77□□□□□ -0.37
Rfc1P35601 Gm45384-201ENSMUST00000210451 277 ntBASIC12.77□□□□□ -0.37
Rfc1P35601 Gm9908-201ENSMUST00000211534 448 ntBASIC12.77□□□□□ -0.37
Rfc1P35601 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.77□□□□□ -0.37
Rfc1P35601 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.77□□□□□ -0.37
Rfc1P35601 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc1P35601 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc1P35601 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc1P35601 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Rfc1P35601 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.77□□□□□ -0.37
Rfc1P35601 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc1P35601 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc1P35601 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.77□□□□□ -0.37
Rfc1P35601 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc1P35601 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc1P35601 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc1P35601 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rfc1P35601 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Rfc1P35601 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rfc1P35601 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Rfc1P35601 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.76□□□□□ -0.37
Rfc1P35601 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.76□□□□□ -0.37
Rfc1P35601 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.76□□□□□ -0.37
Rfc1P35601 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.76□□□□□ -0.37
Rfc1P35601 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.76□□□□□ -0.37
Rfc1P35601 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.76□□□□□ -0.37
Rfc1P35601 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.76□□□□□ -0.37
Rfc1P35601 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rfc1P35601 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rfc1P35601 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rfc1P35601 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Rfc1P35601 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rfc1P35601 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rfc1P35601 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rfc1P35601 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfc1P35601 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms