Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Gm11801-201ENSMUST00000117807 746 ntBASIC11.2□□□□□ -0.62
Sftpa1P35242 Gm8731-201ENSMUST00000118088 412 ntBASIC11.2□□□□□ -0.62
Sftpa1P35242 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.2□□□□□ -0.62
Sftpa1P35242 Gm8737-201ENSMUST00000122208 642 ntBASIC11.2□□□□□ -0.62
Sftpa1P35242 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.2□□□□□ -0.62
Sftpa1P35242 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.2□□□□□ -0.62
Sftpa1P35242 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.2□□□□□ -0.62
Sftpa1P35242 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.2□□□□□ -0.62
Sftpa1P35242 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.2□□□□□ -0.62
Sftpa1P35242 Gm45120-201ENSMUST00000208880 408 ntBASIC11.2□□□□□ -0.62
Sftpa1P35242 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.2□□□□□ -0.62
Sftpa1P35242 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sftpa1P35242 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.2□□□□□ -0.62
Sftpa1P35242 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Sftpa1P35242 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.19□□□□□ -0.62
Sftpa1P35242 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Gm22920-201ENSMUST00000102175 109 ntBASIC11.19□□□□□ -0.62
Sftpa1P35242 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.19□□□□□ -0.62
Sftpa1P35242 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Gm11836-201ENSMUST00000121022 441 ntBASIC11.19□□□□□ -0.62
Sftpa1P35242 Gm14760-201ENSMUST00000121831 999 ntBASIC11.19□□□□□ -0.62
Sftpa1P35242 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Gm17877-201ENSMUST00000192578 814 ntBASIC11.19□□□□□ -0.62
Sftpa1P35242 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sftpa1P35242 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sftpa1P35242 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms