Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.15□□□□□ -0.62
Nedd8P29595 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.15□□□□□ -0.62
Nedd8P29595 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.15□□□□□ -0.62
Nedd8P29595 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nedd8P29595 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.15□□□□□ -0.62
Nedd8P29595 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Nedd8P29595 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Nedd8P29595 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Nedd8P29595 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Nedd8P29595 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nedd8P29595 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Nedd8P29595 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.63
Nedd8P29595 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.15□□□□□ -0.63
Nedd8P29595 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nedd8P29595 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nedd8P29595 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nedd8P29595 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nedd8P29595 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Gm13689-201ENSMUST00000119360 685 ntBASIC11.14□□□□□ -0.63
Nedd8P29595 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.14□□□□□ -0.63
Nedd8P29595 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Nedd8P29595 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.14□□□□□ -0.63
Nedd8P29595 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Nedd8P29595 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.14□□□□□ -0.63
Nedd8P29595 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.14□□□□□ -0.63
Nedd8P29595 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.14□□□□□ -0.63
Nedd8P29595 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.14□□□□□ -0.63
Nedd8P29595 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.14□□□□□ -0.63
Nedd8P29595 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.14□□□□□ -0.63
Nedd8P29595 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.14□□□□□ -0.63
Nedd8P29595 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nedd8P29595 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Nedd8P29595 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.14□□□□□ -0.63
Nedd8P29595 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nedd8P29595 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nedd8P29595 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nedd8P29595 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.13□□□□□ -0.63
Nedd8P29595 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.13□□□□□ -0.63
Nedd8P29595 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nedd8P29595 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.13□□□□□ -0.63
Nedd8P29595 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.13□□□□□ -0.63
Nedd8P29595 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.13□□□□□ -0.63
Nedd8P29595 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nedd8P29595 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Gm9522-201ENSMUST00000182394 926 ntBASIC11.13□□□□□ -0.63
Nedd8P29595 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.13□□□□□ -0.63
Nedd8P29595 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.13□□□□□ -0.63
Nedd8P29595 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms