Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
RxrbP28704 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.18□□□□□ -0.46
RxrbP28704 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.18□□□□□ -0.46
RxrbP28704 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.18□□□□□ -0.46
RxrbP28704 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.17□□□□□ -0.46
RxrbP28704 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RxrbP28704 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RxrbP28704 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RxrbP28704 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
RxrbP28704 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.17□□□□□ -0.46
RxrbP28704 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.17□□□□□ -0.46
RxrbP28704 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.17□□□□□ -0.46
RxrbP28704 Gm26927-201ENSMUST00000182385 965 ntBASIC12.17□□□□□ -0.46
RxrbP28704 Gm29649-201ENSMUST00000185649 419 ntBASIC12.17□□□□□ -0.46
RxrbP28704 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.17□□□□□ -0.46
RxrbP28704 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.17□□□□□ -0.46
RxrbP28704 Gm9794-201ENSMUST00000202370 423 ntBASIC12.17□□□□□ -0.46
RxrbP28704 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.17□□□□□ -0.46
RxrbP28704 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
RxrbP28704 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
RxrbP28704 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.17□□□□□ -0.46
RxrbP28704 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
RxrbP28704 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.17□□□□□ -0.46
RxrbP28704 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RxrbP28704 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.17□□□□□ -0.46
RxrbP28704 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RxrbP28704 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RxrbP28704 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.16□□□□□ -0.46
RxrbP28704 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RxrbP28704 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.16□□□□□ -0.46
RxrbP28704 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
RxrbP28704 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RxrbP28704 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.16□□□□□ -0.46
RxrbP28704 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.16□□□□□ -0.46
RxrbP28704 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.16□□□□□ -0.46
RxrbP28704 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.16□□□□□ -0.46
RxrbP28704 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.16□□□□□ -0.46
RxrbP28704 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.16□□□□□ -0.46
RxrbP28704 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
RxrbP28704 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RxrbP28704 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms