Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.1□□□□□ -0.47
Nckap1P28660 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Gm23596-201ENSMUST00000104304 132 ntBASIC12.1□□□□□ -0.47
Nckap1P28660 Gm24891-201ENSMUST00000104391 136 ntBASIC12.1□□□□□ -0.47
Nckap1P28660 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nckap1P28660 Gm13035-201ENSMUST00000117496 342 ntBASIC12.1□□□□□ -0.47
Nckap1P28660 Gm15432-201ENSMUST00000121106 195 ntBASIC12.1□□□□□ -0.47
Nckap1P28660 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.1□□□□□ -0.47
Nckap1P28660 Mir1943-201ENSMUST00000158276 73 ntBASIC12.1□□□□□ -0.47
Nckap1P28660 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Nckap1P28660 Gm9211-201ENSMUST00000182882 975 ntBASIC12.1□□□□□ -0.47
Nckap1P28660 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.1□□□□□ -0.47
Nckap1P28660 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.1□□□□□ -0.47
Nckap1P28660 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.1□□□□□ -0.47
Nckap1P28660 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.1□□□□□ -0.47
Nckap1P28660 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.1□□□□□ -0.47
Nckap1P28660 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nckap1P28660 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nckap1P28660 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.1□□□□□ -0.47
Nckap1P28660 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.1□□□□□ -0.47
Nckap1P28660 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.09□□□□□ -0.47
Nckap1P28660 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Gm15515-201ENSMUST00000117827 822 ntBASIC12.09□□□□□ -0.47
Nckap1P28660 Gm7722-201ENSMUST00000120646 741 ntBASIC12.09□□□□□ -0.47
Nckap1P28660 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.09□□□□□ -0.47
Nckap1P28660 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Gm5523-201ENSMUST00000180415 997 ntBASIC12.09□□□□□ -0.47
Nckap1P28660 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
Nckap1P28660 Gm3508-201ENSMUST00000186012 792 ntBASIC12.09□□□□□ -0.47
Nckap1P28660 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Gm6905-201ENSMUST00000205729 511 ntBASIC12.09□□□□□ -0.47
Nckap1P28660 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.09□□□□□ -0.47
Nckap1P28660 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.09□□□□□ -0.47
Nckap1P28660 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Nckap1P28660 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.09□□□□□ -0.47
Nckap1P28660 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nckap1P28660 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.09□□□□□ -0.47
Nckap1P28660 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Nckap1P28660 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nckap1P28660 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Nckap1P28660 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.09□□□□□ -0.47
Nckap1P28660 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nckap1P28660 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nckap1P28660 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nckap1P28660 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nckap1P28660 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nckap1P28660 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Paupar-201ENSMUST00000194826 3482 ntBASIC12.08□□□□□ -0.48
Nckap1P28660 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.08□□□□□ -0.48
Nckap1P28660 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms