Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Mir3547-201ENSMUST00000175461 88 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Gm18711-201ENSMUST00000199341 750 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 Gm9555-201ENSMUST00000200908 583 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 Gm43947-201ENSMUST00000203019 959 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Gm8959-201ENSMUST00000213150 571 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 Gm5369-201ENSMUST00000217499 588 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 Gm270-201ENSMUST00000223010 976 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Pck2-205ENSMUST00000226352 2784 ntBASIC12.48□□□□□ -0.41
Nfkb1P25799 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Nfkb1P25799 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.47□□□□□ -0.41
Nfkb1P25799 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.47□□□□□ -0.41
Nfkb1P25799 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nfkb1P25799 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Nfkb1P25799 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.47□□□□□ -0.41
Nfkb1P25799 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Mir7677-201ENSMUST00000184226 67 ntBASIC12.47□□□□□ -0.41
Nfkb1P25799 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Spcs1-203ENSMUST00000226374 592 ntBASIC12.47□□□□□ -0.41
Nfkb1P25799 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nfkb1P25799 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.47□□□□□ -0.41
Nfkb1P25799 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.47□□□□□ -0.41
Nfkb1P25799 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.47□□□□□ -0.41
Nfkb1P25799 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nfkb1P25799 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Nfkb1P25799 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.47□□□□□ -0.41
Nfkb1P25799 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nfkb1P25799 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.46□□□□□ -0.41
Nfkb1P25799 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nfkb1P25799 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nfkb1P25799 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nfkb1P25799 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nfkb1P25799 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nfkb1P25799 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.46□□□□□ -0.41
Nfkb1P25799 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nfkb1P25799 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nfkb1P25799 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nfkb1P25799 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Nfkb1P25799 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nfkb1P25799 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.46□□□□□ -0.41
Nfkb1P25799 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms