Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Gm43703-201ENSMUST00000200523 763 ntBASIC11.04□□□□□ -0.64
Cbx3P23198 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cbx3P23198 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Gm45597-201ENSMUST00000211524 1994 ntBASIC11.04□□□□□ -0.64
Cbx3P23198 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cbx3P23198 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.04□□□□□ -0.64
Cbx3P23198 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.04□□□□□ -0.64
Cbx3P23198 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Cbx3P23198 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.04□□□□□ -0.64
Cbx3P23198 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.04□□□□□ -0.64
Cbx3P23198 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cbx3P23198 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.03□□□□□ -0.64
Cbx3P23198 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.03□□□□□ -0.64
Cbx3P23198 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.03□□□□□ -0.64
Cbx3P23198 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Cbx3P23198 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Gm4875-201ENSMUST00000118257 786 ntBASIC11.03□□□□□ -0.64
Cbx3P23198 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Cbx3P23198 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.03□□□□□ -0.64
Cbx3P23198 Gm9630-201ENSMUST00000178304 885 ntBASIC11.03□□□□□ -0.64
Cbx3P23198 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.03□□□□□ -0.64
Cbx3P23198 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.03□□□□□ -0.64
Cbx3P23198 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.03□□□□□ -0.64
Cbx3P23198 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.03□□□□□ -0.64
Cbx3P23198 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.03□□□□□ -0.64
Cbx3P23198 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cbx3P23198 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cbx3P23198 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cbx3P23198 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cbx3P23198 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cbx3P23198 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cbx3P23198 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Cbx3P23198 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cbx3P23198 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.02□□□□□ -0.64
Cbx3P23198 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cbx3P23198 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cbx3P23198 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cbx3P23198 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cbx3P23198 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cbx3P23198 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cbx3P23198 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cbx3P23198 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.02□□□□□ -0.64
Cbx3P23198 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cbx3P23198 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cbx3P23198 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.02□□□□□ -0.65
Cbx3P23198 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms