Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
BdnfP21237 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.67□□□□□ -0.54
BdnfP21237 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.67□□□□□ -0.54
BdnfP21237 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.67□□□□□ -0.54
BdnfP21237 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Gm4454-201ENSMUST00000190585 2578 ntBASIC11.66□□□□□ -0.54
BdnfP21237 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
BdnfP21237 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
BdnfP21237 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.66□□□□□ -0.54
BdnfP21237 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
BdnfP21237 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
BdnfP21237 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.66□□□□□ -0.54
BdnfP21237 Gm4034-201ENSMUST00000187674 480 ntBASIC11.66□□□□□ -0.54
BdnfP21237 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
BdnfP21237 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
BdnfP21237 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
BdnfP21237 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.66□□□□□ -0.54
BdnfP21237 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.66□□□□□ -0.54
BdnfP21237 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.66□□□□□ -0.54
BdnfP21237 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
BdnfP21237 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
BdnfP21237 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.65□□□□□ -0.54
BdnfP21237 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.65□□□□□ -0.54
BdnfP21237 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
BdnfP21237 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
BdnfP21237 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
BdnfP21237 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
BdnfP21237 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
BdnfP21237 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
BdnfP21237 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.65□□□□□ -0.54
BdnfP21237 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
BdnfP21237 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.65□□□□□ -0.54
BdnfP21237 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.65□□□□□ -0.54
BdnfP21237 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
BdnfP21237 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Gm6222-202ENSMUST00000182143 629 ntBASIC11.65□□□□□ -0.54
BdnfP21237 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
BdnfP21237 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.65□□□□□ -0.54
BdnfP21237 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.65□□□□□ -0.54
BdnfP21237 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.65□□□□□ -0.54
BdnfP21237 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.65□□□□□ -0.54
BdnfP21237 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
BdnfP21237 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.65□□□□□ -0.54
BdnfP21237 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BdnfP21237 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
BdnfP21237 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
BdnfP21237 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.65□□□□□ -0.55
BdnfP21237 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms