Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Gm43817-201ENSMUST00000196459 2262 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Gm6447-201ENSMUST00000118905 835 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Gm43830-201ENSMUST00000198760 1067 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Gm43906-201ENSMUST00000203194 906 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Gm4768-201ENSMUST00000206199 686 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Gm8959-201ENSMUST00000213150 571 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 AC153932.1-201ENSMUST00000218558 787 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 CT009718.3-201ENSMUST00000221116 367 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 AC162940.1-201ENSMUST00000224745 1167 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 AC125539.1-201ENSMUST00000227423 622 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf9P20334 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Gm10434-201ENSMUST00000101158 471 ntBASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Gm23270-201ENSMUST00000104055 131 ntBASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Gm14208-201ENSMUST00000119645 678 ntBASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Gm12502-201ENSMUST00000120197 444 ntBASIC10.16□□□□□ -0.78
Tnfrsf9P20334 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Gm27023-201ENSMUST00000182372 285 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms