Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.27□□□□□ -0.45
VimP20152 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
VimP20152 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.26□□□□□ -0.45
VimP20152 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
VimP20152 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
VimP20152 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
VimP20152 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.26□□□□□ -0.45
VimP20152 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.26□□□□□ -0.45
VimP20152 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
VimP20152 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.26□□□□□ -0.45
VimP20152 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.26□□□□□ -0.45
VimP20152 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.26□□□□□ -0.45
VimP20152 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
VimP20152 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.26□□□□□ -0.45
VimP20152 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
VimP20152 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.26□□□□□ -0.45
VimP20152 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.26□□□□□ -0.45
VimP20152 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.26□□□□□ -0.45
VimP20152 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VimP20152 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.26□□□□□ -0.45
VimP20152 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.26□□□□□ -0.45
VimP20152 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
VimP20152 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.25□□□□□ -0.45
VimP20152 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.25□□□□□ -0.45
VimP20152 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.25□□□□□ -0.45
VimP20152 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.25□□□□□ -0.45
VimP20152 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
VimP20152 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
VimP20152 Gm13453-201ENSMUST00000118708 357 ntBASIC12.25□□□□□ -0.45
VimP20152 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.25□□□□□ -0.45
VimP20152 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
VimP20152 Rmrp-201ENSMUST00000157463 271 ntBASIC12.25□□□□□ -0.45
VimP20152 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.25□□□□□ -0.45
VimP20152 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.25□□□□□ -0.45
VimP20152 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
VimP20152 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
VimP20152 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
VimP20152 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.25□□□□□ -0.45
VimP20152 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.25□□□□□ -0.45
VimP20152 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.25□□□□□ -0.45
VimP20152 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VimP20152 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
VimP20152 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms