Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa6P09092 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Hoxa6P09092 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hoxa6P09092 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hoxa6P09092 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.52□□□□□ -0.72
Hoxa6P09092 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.52□□□□□ -0.72
Hoxa6P09092 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.52□□□□□ -0.72
Hoxa6P09092 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hoxa6P09092 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Hoxa6P09092 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.52□□□□□ -0.73
Hoxa6P09092 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Hoxa6P09092 Gm23949-201ENSMUST00000104027 127 ntBASIC10.52□□□□□ -0.73
Hoxa6P09092 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.73
Hoxa6P09092 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.52□□□□□ -0.73
Hoxa6P09092 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.52□□□□□ -0.73
Hoxa6P09092 Gm12566-201ENSMUST00000121479 359 ntBASIC10.52□□□□□ -0.73
Hoxa6P09092 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.52□□□□□ -0.73
Hoxa6P09092 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.52□□□□□ -0.73
Hoxa6P09092 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Gm27627-201ENSMUST00000183644 150 ntBASIC10.52□□□□□ -0.73
Hoxa6P09092 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.52□□□□□ -0.73
Hoxa6P09092 Gm28450-201ENSMUST00000187349 638 ntBASIC10.52□□□□□ -0.73
Hoxa6P09092 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.52□□□□□ -0.73
Hoxa6P09092 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.52□□□□□ -0.73
Hoxa6P09092 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.52□□□□□ -0.73
Hoxa6P09092 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.52□□□□□ -0.73
Hoxa6P09092 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.52□□□□□ -0.73
Hoxa6P09092 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Hoxa6P09092 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.52□□□□□ -0.73
Hoxa6P09092 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.52□□□□□ -0.73
Hoxa6P09092 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Hoxa6P09092 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Hoxa6P09092 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa6P09092 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Hoxa6P09092 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.51□□□□□ -0.73
Hoxa6P09092 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Hoxa6P09092 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Gm11989-201ENSMUST00000117240 672 ntBASIC10.51□□□□□ -0.73
Hoxa6P09092 Gm11362-201ENSMUST00000118838 850 ntBASIC10.51□□□□□ -0.73
Hoxa6P09092 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Hoxa6P09092 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.51□□□□□ -0.73
Hoxa6P09092 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Hoxa6P09092 Gm27552-201ENSMUST00000183351 62 ntBASIC10.51□□□□□ -0.73
Hoxa6P09092 Gm27844-201ENSMUST00000183613 62 ntBASIC10.51□□□□□ -0.73
Hoxa6P09092 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.51□□□□□ -0.73
Hoxa6P09092 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Hoxa6P09092 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hoxa6P09092 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.51□□□□□ -0.73
Hoxa6P09092 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms