Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Hoxa3P02831 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Hoxa3P02831 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.2□□□□□ -0.78
Hoxa3P02831 Gm14644-201ENSMUST00000116671 647 ntBASIC10.2□□□□□ -0.78
Hoxa3P02831 Gm7857-201ENSMUST00000117957 358 ntBASIC10.2□□□□□ -0.78
Hoxa3P02831 Gm4909-201ENSMUST00000118749 794 ntBASIC10.2□□□□□ -0.78
Hoxa3P02831 Gm12217-201ENSMUST00000118858 696 ntBASIC10.2□□□□□ -0.78
Hoxa3P02831 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Hoxa3P02831 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.2□□□□□ -0.78
Hoxa3P02831 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.2□□□□□ -0.78
Hoxa3P02831 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.2□□□□□ -0.78
Hoxa3P02831 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.2□□□□□ -0.78
Hoxa3P02831 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.2□□□□□ -0.78
Hoxa3P02831 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.2□□□□□ -0.78
Hoxa3P02831 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Hoxa3P02831 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Hoxa3P02831 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hoxa3P02831 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.19□□□□□ -0.78
Hoxa3P02831 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Gm13296-201ENSMUST00000117854 997 ntBASIC10.19□□□□□ -0.78
Hoxa3P02831 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Mir5120-201ENSMUST00000175020 78 ntBASIC10.19□□□□□ -0.78
Hoxa3P02831 Gm25732-201ENSMUST00000175168 60 ntBASIC10.19□□□□□ -0.78
Hoxa3P02831 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Gm37666-201ENSMUST00000194110 866 ntBASIC10.19□□□□□ -0.78
Hoxa3P02831 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.19□□□□□ -0.78
Hoxa3P02831 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.19□□□□□ -0.78
Hoxa3P02831 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms