Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
P01852 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
P01852 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.11□□□□□ -0.63
P01852 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.11□□□□□ -0.63
P01852 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.11□□□□□ -0.63
P01852 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P01852 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Rprl1-202ENSMUST00000198476 238 ntBASIC11.11□□□□□ -0.63
P01852 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.11□□□□□ -0.63
P01852 Gm44967-201ENSMUST00000207047 631 ntBASIC11.11□□□□□ -0.63
P01852 Gm44651-201ENSMUST00000207343 372 ntBASIC11.11□□□□□ -0.63
P01852 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.11□□□□□ -0.63
P01852 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.11□□□□□ -0.63
P01852 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
P01852 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
P01852 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P01852 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
P01852 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
P01852 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.11□□□□□ -0.63
P01852 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
P01852 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P01852 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.11□□□□□ -0.63
P01852 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01852 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.1□□□□□ -0.63
P01852 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P01852 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Gm14644-201ENSMUST00000116671 647 ntBASIC11.1□□□□□ -0.63
P01852 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.1□□□□□ -0.63
P01852 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.1□□□□□ -0.63
P01852 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
P01852 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.1□□□□□ -0.63
P01852 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Gm6963-201ENSMUST00000147879 379 ntBASIC11.1□□□□□ -0.63
P01852 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.1□□□□□ -0.63
P01852 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.1□□□□□ -0.63
P01852 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.1□□□□□ -0.63
P01852 Gm9230-201ENSMUST00000188228 532 ntBASIC11.1□□□□□ -0.63
P01852 Gm38241-201ENSMUST00000192641 898 ntBASIC11.1□□□□□ -0.63
P01852 Gm19994-201ENSMUST00000217086 586 ntBASIC11.1□□□□□ -0.63
P01852 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.1□□□□□ -0.63
P01852 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.1□□□□□ -0.63
P01852 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.1□□□□□ -0.63
P01852 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.1□□□□□ -0.63
P01852 Gzmn-202ENSMUST00000225535 989 ntBASIC11.1□□□□□ -0.63
P01852 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P01852 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.1□□□□□ -0.63
P01852 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.1□□□□□ -0.63
P01852 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01852 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms