Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.42□□□□□ -0.58
Matn4O89029 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Matn4O89029 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.42□□□□□ -0.58
Matn4O89029 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.42□□□□□ -0.58
Matn4O89029 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Matn4O89029 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.42□□□□□ -0.58
Matn4O89029 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Matn4O89029 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.42□□□□□ -0.58
Matn4O89029 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Gm25261-201ENSMUST00000157416 134 ntBASIC11.42□□□□□ -0.58
Matn4O89029 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.42□□□□□ -0.58
Matn4O89029 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.42□□□□□ -0.58
Matn4O89029 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.42□□□□□ -0.58
Matn4O89029 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Gm17931-201ENSMUST00000208132 634 ntBASIC11.42□□□□□ -0.58
Matn4O89029 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.42□□□□□ -0.58
Matn4O89029 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.42□□□□□ -0.58
Matn4O89029 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.42□□□□□ -0.58
Matn4O89029 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Snora73a-201ENSMUST00000082453 205 ntBASIC11.42□□□□□ -0.58
Matn4O89029 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.42□□□□□ -0.58
Matn4O89029 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Matn4O89029 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.42□□□□□ -0.58
Matn4O89029 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.42□□□□□ -0.58
Matn4O89029 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Matn4O89029 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.42□□□□□ -0.58
Matn4O89029 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn4O89029 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.41□□□□□ -0.58
Matn4O89029 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.41□□□□□ -0.58
Matn4O89029 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Matn4O89029 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.41□□□□□ -0.58
Matn4O89029 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.41□□□□□ -0.58
Matn4O89029 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.41□□□□□ -0.58
Matn4O89029 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.41□□□□□ -0.58
Matn4O89029 Rprl1-201ENSMUST00000158050 327 ntBASIC11.41□□□□□ -0.58
Matn4O89029 Gm16379-201ENSMUST00000161469 348 ntBASIC11.41□□□□□ -0.58
Matn4O89029 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Matn4O89029 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.41□□□□□ -0.58
Matn4O89029 Gm8762-201ENSMUST00000193486 339 ntBASIC11.41□□□□□ -0.58
Matn4O89029 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.41□□□□□ -0.58
Matn4O89029 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.41□□□□□ -0.58
Matn4O89029 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.41□□□□□ -0.58
Matn4O89029 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Matn4O89029 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Matn4O89029 Gm8420-201ENSMUST00000097103 598 ntBASIC11.41□□□□□ -0.58
Matn4O89029 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
Matn4O89029 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Matn4O89029 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.41□□□□□ -0.58
Matn4O89029 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.41□□□□□ -0.58
Matn4O89029 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn4O89029 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
Matn4O89029 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn4O89029 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn4O89029 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Matn4O89029 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn4O89029 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Matn4O89029 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn4O89029 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn4O89029 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Matn4O89029 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms