Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Chrna4O70174 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Chrna4O70174 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Chrna4O70174 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Chrna4O70174 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.22□□□□□ -0.45
Chrna4O70174 Gm13350-201ENSMUST00000120519 479 ntBASIC12.22□□□□□ -0.45
Chrna4O70174 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.22□□□□□ -0.45
Chrna4O70174 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.22□□□□□ -0.45
Chrna4O70174 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.22□□□□□ -0.45
Chrna4O70174 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Chrna4O70174 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Chrna4O70174 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.21□□□□□ -0.45
Chrna4O70174 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Chrna4O70174 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Chrna4O70174 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.21□□□□□ -0.45
Chrna4O70174 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.21□□□□□ -0.45
Chrna4O70174 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 Gm20482-202ENSMUST00000174729 825 ntBASIC12.21□□□□□ -0.45
Chrna4O70174 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.21□□□□□ -0.45
Chrna4O70174 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.21□□□□□ -0.45
Chrna4O70174 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chrna4O70174 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chrna4O70174 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Chrna4O70174 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chrna4O70174 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chrna4O70174 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chrna4O70174 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chrna4O70174 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chrna4O70174 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.21□□□□□ -0.46
Chrna4O70174 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chrna4O70174 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Chrna4O70174 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Chrna4O70174 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chrna4O70174 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chrna4O70174 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.2□□□□□ -0.46
Chrna4O70174 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Chrna4O70174 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.2□□□□□ -0.46
Chrna4O70174 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.2□□□□□ -0.46
Chrna4O70174 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chrna4O70174 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Chrna4O70174 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.2□□□□□ -0.46
Chrna4O70174 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Chrna4O70174 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Chrna4O70174 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chrna4O70174 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chrna4O70174 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Gm17376-201ENSMUST00000166016 84 ntBASIC12.2□□□□□ -0.46
Chrna4O70174 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Chrna4O70174 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chrna4O70174 Gm5706-201ENSMUST00000181525 993 ntBASIC12.2□□□□□ -0.46
Chrna4O70174 AA914427-201ENSMUST00000193194 1166 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms