Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Mir3547-201ENSMUST00000175461 88 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Gm9211-201ENSMUST00000182882 975 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 Gm19353-201ENSMUST00000184561 445 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 Gm37246-201ENSMUST00000192665 835 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 Gm6905-201ENSMUST00000205729 511 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 Ntng1-201ENSMUST00000051253 327 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Cxcl13O55038 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.24□□□□□ -0.77
Cxcl13O55038 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Cxcl13O55038 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Cxcl13O55038 Gm11663-201ENSMUST00000117888 290 ntBASIC10.24□□□□□ -0.77
Cxcl13O55038 Gm15432-201ENSMUST00000121106 195 ntBASIC10.24□□□□□ -0.77
Cxcl13O55038 Gm12176-201ENSMUST00000121420 875 ntBASIC10.24□□□□□ -0.77
Cxcl13O55038 Gm22334-201ENSMUST00000158070 133 ntBASIC10.24□□□□□ -0.77
Cxcl13O55038 Mir1943-201ENSMUST00000158276 73 ntBASIC10.24□□□□□ -0.77
Cxcl13O55038 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cxcl13O55038 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.24□□□□□ -0.77
Cxcl13O55038 Gm9797-202ENSMUST00000218003 294 ntBASIC10.24□□□□□ -0.77
Cxcl13O55038 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.24□□□□□ -0.77
Cxcl13O55038 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cxcl13O55038 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cxcl13O55038 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cxcl13O55038 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Cxcl13O55038 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Cxcl13O55038 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Cxcl13O55038 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cxcl13O55038 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cxcl13O55038 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm12616-201ENSMUST00000118594 382 ntBASIC10.23□□□□□ -0.77
Cxcl13O55038 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm12624-201ENSMUST00000177615 382 ntBASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm12621-201ENSMUST00000177760 382 ntBASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm12615-201ENSMUST00000177970 382 ntBASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm12622-201ENSMUST00000177975 382 ntBASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm12627-201ENSMUST00000178412 382 ntBASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm12625-201ENSMUST00000179122 382 ntBASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm12614-201ENSMUST00000179586 382 ntBASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm12613-201ENSMUST00000180323 382 ntBASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms