Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 Gm14381-201ENSMUST00000122105 414 ntBASIC10.58□□□□□ -0.72
Atf6bO35451 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.58□□□□□ -0.72
Atf6bO35451 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.58□□□□□ -0.72
Atf6bO35451 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.58□□□□□ -0.72
Atf6bO35451 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 Gm10076-201ENSMUST00000073238 384 ntBASIC10.58□□□□□ -0.72
Atf6bO35451 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Atf6bO35451 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.58□□□□□ -0.72
Atf6bO35451 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Atf6bO35451 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Atf6bO35451 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Atf6bO35451 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.58□□□□□ -0.72
Atf6bO35451 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Atf6bO35451 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atf6bO35451 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.58□□□□□ -0.72
Atf6bO35451 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Atf6bO35451 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Atf6bO35451 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.57□□□□□ -0.72
Atf6bO35451 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.57□□□□□ -0.72
Atf6bO35451 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Atf6bO35451 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.57□□□□□ -0.72
Atf6bO35451 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Atf6bO35451 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.57□□□□□ -0.72
Atf6bO35451 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Gm24255-201ENSMUST00000104481 128 ntBASIC10.57□□□□□ -0.72
Atf6bO35451 Gm14726-201ENSMUST00000120623 896 ntBASIC10.57□□□□□ -0.72
Atf6bO35451 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.57□□□□□ -0.72
Atf6bO35451 Gm14760-201ENSMUST00000121831 999 ntBASIC10.57□□□□□ -0.72
Atf6bO35451 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.57□□□□□ -0.72
Atf6bO35451 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.57□□□□□ -0.72
Atf6bO35451 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Atf6bO35451 Gm27243-201ENSMUST00000183964 521 ntBASIC10.57□□□□□ -0.72
Atf6bO35451 Gm31256-201ENSMUST00000194705 506 ntBASIC10.57□□□□□ -0.72
Atf6bO35451 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.57□□□□□ -0.72
Atf6bO35451 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.57□□□□□ -0.72
Atf6bO35451 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.57□□□□□ -0.72
Atf6bO35451 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.57□□□□□ -0.72
Atf6bO35451 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Atf6bO35451 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Atf6bO35451 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Atf6bO35451 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Atf6bO35451 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atf6bO35451 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Atf6bO35451 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Atf6bO35451 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Atf6bO35451 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
Atf6bO35451 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms