Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ebf3O08791 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.63□□□□□ -0.39
Ebf3O08791 Gm11989-201ENSMUST00000117240 672 ntBASIC12.63□□□□□ -0.39
Ebf3O08791 Gm11362-201ENSMUST00000118838 850 ntBASIC12.63□□□□□ -0.39
Ebf3O08791 Gm11450-201ENSMUST00000121144 333 ntBASIC12.63□□□□□ -0.39
Ebf3O08791 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Gm9022-201ENSMUST00000182482 992 ntBASIC12.63□□□□□ -0.39
Ebf3O08791 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Ebf3O08791 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.63□□□□□ -0.39
Ebf3O08791 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.63□□□□□ -0.39
Ebf3O08791 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.63□□□□□ -0.39
Ebf3O08791 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.63□□□□□ -0.39
Ebf3O08791 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ebf3O08791 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.63□□□□□ -0.39
Ebf3O08791 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.63□□□□□ -0.39
Ebf3O08791 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.63□□□□□ -0.39
Ebf3O08791 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ebf3O08791 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf3O08791 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ebf3O08791 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.62□□□□□ -0.39
Ebf3O08791 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ebf3O08791 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.62□□□□□ -0.39
Ebf3O08791 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ebf3O08791 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Ebf3O08791 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.62□□□□□ -0.39
Ebf3O08791 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.62□□□□□ -0.39
Ebf3O08791 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ebf3O08791 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.62□□□□□ -0.39
Ebf3O08791 Mir7032-201ENSMUST00000185154 79 ntBASIC12.62□□□□□ -0.39
Ebf3O08791 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.62□□□□□ -0.39
Ebf3O08791 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.62□□□□□ -0.39
Ebf3O08791 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.62□□□□□ -0.39
Ebf3O08791 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ebf3O08791 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ebf3O08791 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf3O08791 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.61□□□□□ -0.39
Ebf3O08791 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.61□□□□□ -0.39
Ebf3O08791 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.61□□□□□ -0.39
Ebf3O08791 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ebf3O08791 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.61□□□□□ -0.39
Ebf3O08791 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ebf3O08791 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Ebf3O08791 Gm15515-201ENSMUST00000117827 822 ntBASIC12.61□□□□□ -0.39
Ebf3O08791 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.61□□□□□ -0.39
Ebf3O08791 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.61□□□□□ -0.39
Ebf3O08791 Gm7467-201ENSMUST00000185173 652 ntBASIC12.61□□□□□ -0.39
Ebf3O08791 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.61□□□□□ -0.39
Ebf3O08791 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.61□□□□□ -0.39
Ebf3O08791 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.61□□□□□ -0.39
Ebf3O08791 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.61□□□□□ -0.39
Ebf3O08791 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms