Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tcof1O08784 Gm23949-201ENSMUST00000104027 127 ntBASIC14.19□□□□□ -0.14
Tcof1O08784 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.19□□□□□ -0.14
Tcof1O08784 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.19□□□□□ -0.14
Tcof1O08784 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.19□□□□□ -0.14
Tcof1O08784 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.19□□□□□ -0.14
Tcof1O08784 Gm35960-201ENSMUST00000202712 767 ntBASIC14.19□□□□□ -0.14
Tcof1O08784 Gm4607-201ENSMUST00000206649 577 ntBASIC14.19□□□□□ -0.14
Tcof1O08784 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tcof1O08784 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tcof1O08784 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tcof1O08784 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.19□□□□□ -0.14
Tcof1O08784 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Tcof1O08784 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tcof1O08784 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tcof1O08784 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.19□□□□□ -0.14
Tcof1O08784 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcof1O08784 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.18□□□□□ -0.14
Tcof1O08784 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcof1O08784 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.18□□□□□ -0.14
Tcof1O08784 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcof1O08784 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.18□□□□□ -0.14
Tcof1O08784 Gm22334-201ENSMUST00000158070 133 ntBASIC14.18□□□□□ -0.14
Tcof1O08784 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Tcof1O08784 Gm24514-201ENSMUST00000174961 285 ntBASIC14.18□□□□□ -0.14
Tcof1O08784 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.18□□□□□ -0.14
Tcof1O08784 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.18□□□□□ -0.14
Tcof1O08784 Gm43378-201ENSMUST00000199336 582 ntBASIC14.18□□□□□ -0.14
Tcof1O08784 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.18□□□□□ -0.14
Tcof1O08784 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.18□□□□□ -0.14
Tcof1O08784 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Tcof1O08784 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Tcof1O08784 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Tcof1O08784 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcof1O08784 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.18□□□□□ -0.14
Tcof1O08784 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcof1O08784 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcof1O08784 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcof1O08784 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Tcof1O08784 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.18□□□□□ -0.14
Tcof1O08784 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcof1O08784 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.18□□□□□ -0.14
Tcof1O08784 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tcof1O08784 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.18□□□□□ -0.14
Tcof1O08784 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.18□□□□□ -0.14
Tcof1O08784 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tcof1O08784 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tcof1O08784 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tcof1O08784 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Tcof1O08784 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcof1O08784 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tcof1O08784 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.17□□□□□ -0.14
Tcof1O08784 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcof1O08784 Gm8959-201ENSMUST00000213150 571 ntBASIC14.17□□□□□ -0.14
Tcof1O08784 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.17□□□□□ -0.14
Tcof1O08784 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcof1O08784 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.17□□□□□ -0.14
Tcof1O08784 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.17□□□□□ -0.14
Tcof1O08784 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcof1O08784 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.17□□□□□ -0.14
Tcof1O08784 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tcof1O08784 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tcof1O08784 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.17□□□□□ -0.14
Tcof1O08784 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcof1O08784 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.17□□□□□ -0.14
Tcof1O08784 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcof1O08784 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tcof1O08784 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.17□□□□□ -0.14
Tcof1O08784 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tcof1O08784 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.17□□□□□ -0.14
Tcof1O08784 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcof1O08784 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcof1O08784 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcof1O08784 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcof1O08784 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms