Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm14395-201ENSMUST00000120494 563 ntBASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Gm26134-201ENSMUST00000178484 110 ntBASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Gm8197-202ENSMUST00000193422 934 ntBASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Gm3726-201ENSMUST00000203110 785 ntBASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Gm4811-201ENSMUST00000220879 1220 ntBASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Ap3s1-202ENSMUST00000224622 978 ntBASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 AC164618.2-201ENSMUST00000224770 573 ntBASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC21.79■■□□□ 1.08
Ccdc180J3QNE4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 Map1b-203ENSMUST00000223725 2669 ntBASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 Gm9111-201ENSMUST00000219394 709 ntBASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 Gm23105-201ENSMUST00000083719 134 ntBASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 Gm33366-201ENSMUST00000195583 3827 ntBASIC21.78■■□□□ 1.08
Ccdc180J3QNE4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Gm13600-201ENSMUST00000117949 744 ntBASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Gm45594-201ENSMUST00000211717 241 ntBASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 CT009546.1-201ENSMUST00000222573 1120 ntBASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Gm44152-201ENSMUST00000205007 1691 ntBASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Ccdc180J3QNE4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Ccdc180J3QNE4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Gm12628-201ENSMUST00000122193 382 ntBASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Gm28324-201ENSMUST00000187913 264 ntBASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Gm44831-201ENSMUST00000208469 2989 ntBASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 AC154176.1-201ENSMUST00000225897 220 ntBASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 AC166836.1-201ENSMUST00000219933 1795 ntBASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Gm9796-201ENSMUST00000062249 2250 ntBASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc180J3QNE4 Gm5982-201ENSMUST00000196234 512 ntBASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms