Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scaf11E9PZM7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scaf11E9PZM7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Scaf11E9PZM7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Scaf11E9PZM7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scaf11E9PZM7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scaf11E9PZM7 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC16.68■□□□□ 0.26
Scaf11E9PZM7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Gm9034-201ENSMUST00000182071 1005 ntBASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Gm37782-201ENSMUST00000194879 678 ntBASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Gm43671-201ENSMUST00000200422 433 ntBASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Gm44942-201ENSMUST00000096093 2072 ntBASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Gm17931-201ENSMUST00000208132 634 ntBASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Gm5599-201ENSMUST00000209602 788 ntBASIC16.67■□□□□ 0.26
Scaf11E9PZM7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC16.67■□□□□ 0.26
Scaf11E9PZM7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 AC158636.1-201ENSMUST00000220118 1393 ntBASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Gm18227-201ENSMUST00000211082 1468 ntBASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Gm25226-201ENSMUST00000158198 123 ntBASIC16.66■□□□□ 0.26
Scaf11E9PZM7 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Gm45481-201ENSMUST00000209717 877 ntBASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Gm7904-201ENSMUST00000217049 465 ntBASIC16.66■□□□□ 0.26
Scaf11E9PZM7 CT009527.1-201ENSMUST00000224205 339 ntBASIC16.66■□□□□ 0.26
Scaf11E9PZM7 CT030652.1-201ENSMUST00000227377 1235 ntBASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scaf11E9PZM7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Gm11996-201ENSMUST00000117538 915 ntBASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Gm25554-201ENSMUST00000158075 113 ntBASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Gm7940-201ENSMUST00000218195 769 ntBASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms