Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdh17E9PXF0 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.33□□□□□ -0.59
Pcdh17E9PXF0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdh17E9PXF0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Gm23949-201ENSMUST00000104027 127 ntBASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Gm11331-201ENSMUST00000119764 288 ntBASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Gm12176-201ENSMUST00000121420 875 ntBASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 AU022133-201ENSMUST00000200601 873 ntBASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh17E9PXF0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Gm11989-201ENSMUST00000117240 672 ntBASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Gm11362-201ENSMUST00000118838 850 ntBASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Gm18734-201ENSMUST00000172937 808 ntBASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh17E9PXF0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 162.3 ms