Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Gm17192-201ENSMUST00000169031 511 ntBASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Dchs1E9PVD3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Gm29304-201ENSMUST00000186555 695 ntBASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Gm29223-201ENSMUST00000188867 695 ntBASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Gm37921-201ENSMUST00000194333 695 ntBASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 AC137950.2-202ENSMUST00000227150 1635 ntBASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Dchs1E9PVD3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Gm34379-201ENSMUST00000195036 290 ntBASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Gm18123-201ENSMUST00000210874 822 ntBASIC10.43□□□□□ -0.74
Dchs1E9PVD3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Gm12791-201ENSMUST00000120788 655 ntBASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Gm15620-201ENSMUST00000122949 270 ntBASIC10.43□□□□□ -0.74
Dchs1E9PVD3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Gm24809-201ENSMUST00000175318 271 ntBASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms