Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm38092-201ENSMUST00000195600 653 ntBASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Gm18584-201ENSMUST00000203098 964 ntBASIC12.2□□□□□ -0.46
Gm28043E0CXC2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Gm24526-201ENSMUST00000082921 158 ntBASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Gm26035-201ENSMUST00000083065 308 ntBASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Gm23931-201ENSMUST00000103842 109 ntBASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Gm5370-201ENSMUST00000187187 574 ntBASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.19□□□□□ -0.46
Gm28043E0CXC2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm28043E0CXC2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Gm13492-201ENSMUST00000119772 665 ntBASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Gm6222-202ENSMUST00000182143 629 ntBASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Mir7085-201ENSMUST00000184353 66 ntBASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.18□□□□□ -0.46
Gm28043E0CXC2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms