Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm4294-201ENSMUST00000105169 614 ntBASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Gm25492-201ENSMUST00000157383 129 ntBASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Gm22846-201ENSMUST00000157706 270 ntBASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Gm9507-202ENSMUST00000180157 654 ntBASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Gm19046-201ENSMUST00000221263 1298 ntBASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Arhgef33-207ENSMUST00000224966 490 ntBASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Gm42941-201ENSMUST00000200347 1321 ntBASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Gm12663-201ENSMUST00000118481 958 ntBASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Gm13445-201ENSMUST00000121664 307 ntBASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Gm43671-201ENSMUST00000200422 433 ntBASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hfm1D3Z4R1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Gm13347-201ENSMUST00000120298 1353 ntBASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Gm12247-201ENSMUST00000117585 670 ntBASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Gm6114-201ENSMUST00000182472 968 ntBASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Hfm1D3Z4R1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Map1b-203ENSMUST00000223725 2669 ntBASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Gm15374-201ENSMUST00000119313 844 ntBASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Gm4895-201ENSMUST00000181646 1137 ntBASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Gm5700-201ENSMUST00000191483 989 ntBASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Gm3318-201ENSMUST00000217604 1183 ntBASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hfm1D3Z4R1 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Gm11619-201ENSMUST00000117474 237 ntBASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms