Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Gm11473-201ENSMUST00000118980 359 ntBASIC9.75□□□□□ -0.85
Chd6A3KFM7 Gm25569-201ENSMUST00000157175 131 ntBASIC9.75□□□□□ -0.85
Chd6A3KFM7 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Gm43380-201ENSMUST00000200421 220 ntBASIC9.75□□□□□ -0.85
Chd6A3KFM7 Gm44315-201ENSMUST00000203041 219 ntBASIC9.75□□□□□ -0.85
Chd6A3KFM7 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Chd6A3KFM7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm24933-201ENSMUST00000103762 110 ntBASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm23252-201ENSMUST00000103776 110 ntBASIC9.74□□□□□ -0.85
Chd6A3KFM7 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm26443-201ENSMUST00000179610 110 ntBASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm7765-201ENSMUST00000182585 974 ntBASIC9.74□□□□□ -0.85
Chd6A3KFM7 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm9025-201ENSMUST00000122415 1575 ntBASIC9.74□□□□□ -0.85
Chd6A3KFM7 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm12774-201ENSMUST00000117881 416 ntBASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm26313-201ENSMUST00000157770 308 ntBASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm16228-201ENSMUST00000162286 809 ntBASIC9.74□□□□□ -0.85
Chd6A3KFM7 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm8197-202ENSMUST00000193422 934 ntBASIC9.74□□□□□ -0.85
Chd6A3KFM7 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms