Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Gm14660-201ENSMUST00000119809 575 ntBASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Gm18711-201ENSMUST00000199341 750 ntBASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc112A0AUP1 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.83□□□□□ -0.19
Ccdc112A0AUP1 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc112A0AUP1 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc112A0AUP1 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc112A0AUP1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc112A0AUP1 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Gm45784-201ENSMUST00000188360 142 ntBASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc112A0AUP1 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Gm13226-201ENSMUST00000117838 404 ntBASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Gm28882-201ENSMUST00000185504 314 ntBASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms