Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 AC125374.1-201ENSMUST00000213573 1400 ntBASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 AC131029.1-201ENSMUST00000226391 2929 ntBASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm43868-201ENSMUST00000205187 2114 ntBASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Kpna6-202ENSMUST00000102590 5710 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Ammecr1l-201ENSMUST00000115808 4769 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm15794-201ENSMUST00000120182 631 ntBASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm13436-201ENSMUST00000120418 567 ntBASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm43073-201ENSMUST00000198200 1189 ntBASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm43935-201ENSMUST00000203569 1050 ntBASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Cmtm5-203ENSMUST00000227441 610 ntBASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Trak1-211ENSMUST00000211187 4043 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC5.81□□□□□ -1.48
Gm3880A0A1B0GSB3 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms