Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Gm23699-201ENSMUST00000158835 135 ntBASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 AY036118-201ENSMUST00000200021 923 ntBASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cfap99A0A140LIX9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cfap99A0A140LIX9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cfap99A0A140LIX9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cfap99A0A140LIX9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cfap99A0A140LIX9 Cog3-203ENSMUST00000227473 4197 ntBASIC14.52□□□□□ -0.08
Cfap99A0A140LIX9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cfap99A0A140LIX9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.52□□□□□ -0.08
Cfap99A0A140LIX9 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Gm12314-201ENSMUST00000118104 538 ntBASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap99A0A140LIX9 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Gm15782-201ENSMUST00000121073 445 ntBASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Gm9230-201ENSMUST00000188228 532 ntBASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Gm28071-201ENSMUST00000190355 478 ntBASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap99A0A140LIX9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms