Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Mir1247-201ENSMUST00000116706 82 ntBASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Gm13226-201ENSMUST00000117838 404 ntBASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Gm13570-201ENSMUST00000140763 309 ntBASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc194A0A140LIT1 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Gm37008-201ENSMUST00000195712 319 ntBASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Gm42693-201ENSMUST00000196779 631 ntBASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms