Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Gm13315-201ENSMUST00000120376 991 ntBASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Gm7809-201ENSMUST00000153199 742 ntBASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Gm27731-201ENSMUST00000185192 107 ntBASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Gm3890-201ENSMUST00000182416 207 ntBASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Gm27390-201ENSMUST00000184516 176 ntBASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Gm45930-201ENSMUST00000221330 292 ntBASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Gm24136-201ENSMUST00000083374 165 ntBASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms