Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gm17376-201ENSMUST00000166016 84 ntBASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gm27023-201ENSMUST00000182372 285 ntBASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn13Q9Z0S4 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Gm14999-201ENSMUST00000121039 624 ntBASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Gm26083-201ENSMUST00000157904 193 ntBASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 Gm6082-201ENSMUST00000215204 454 ntBASIC10.84□□□□□ -0.67
Cldn13Q9Z0S4 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms