Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim3Q9R1R2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim3Q9R1R2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim3Q9R1R2 Gm8018-201ENSMUST00000173536 789 ntBASIC11.46□□□□□ -0.57
Trim3Q9R1R2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim3Q9R1R2 Gm44405-201ENSMUST00000198952 126 ntBASIC11.46□□□□□ -0.57
Trim3Q9R1R2 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.46□□□□□ -0.57
Trim3Q9R1R2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.46□□□□□ -0.57
Trim3Q9R1R2 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.46□□□□□ -0.57
Trim3Q9R1R2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.46□□□□□ -0.57
Trim3Q9R1R2 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.46□□□□□ -0.57
Trim3Q9R1R2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.46□□□□□ -0.57
Trim3Q9R1R2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.46□□□□□ -0.57
Trim3Q9R1R2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim3Q9R1R2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim3Q9R1R2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trim3Q9R1R2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.46□□□□□ -0.57
Trim3Q9R1R2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim3Q9R1R2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim3Q9R1R2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim3Q9R1R2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim3Q9R1R2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim3Q9R1R2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim3Q9R1R2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim3Q9R1R2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim3Q9R1R2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim3Q9R1R2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim3Q9R1R2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim3Q9R1R2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trim3Q9R1R2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim3Q9R1R2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trim3Q9R1R2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim3Q9R1R2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Gm24255-201ENSMUST00000104481 128 ntBASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Gm12058-201ENSMUST00000118614 437 ntBASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Gm13736-201ENSMUST00000119272 253 ntBASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Rmrp-201ENSMUST00000157463 271 ntBASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Gm2546-201ENSMUST00000182630 991 ntBASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim3Q9R1R2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.44□□□□□ -0.58
Trim3Q9R1R2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Gm22323-201ENSMUST00000103832 109 ntBASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Gm13875-201ENSMUST00000120162 282 ntBASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Gm11597-201ENSMUST00000121423 964 ntBASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Trim3Q9R1R2 Gm9630-201ENSMUST00000178304 885 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms