Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rtn3Q9ES97 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Gm15236-201ENSMUST00000117309 379 ntBASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Gm44882-201ENSMUST00000205702 802 ntBASIC12.94□□□□□ -0.34
Rtn3Q9ES97 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Gm6082-201ENSMUST00000215204 454 ntBASIC12.94□□□□□ -0.34
Rtn3Q9ES97 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.94□□□□□ -0.34
Rtn3Q9ES97 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Gm15808-201ENSMUST00000119046 604 ntBASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.93□□□□□ -0.34
Rtn3Q9ES97 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Gm39404-201ENSMUST00000216350 313 ntBASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Rtn3Q9ES97 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms