Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Gm38092-201ENSMUST00000195600 653 ntBASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Gm14726-201ENSMUST00000120623 896 ntBASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Gm31256-201ENSMUST00000194705 506 ntBASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Gm44882-201ENSMUST00000205702 802 ntBASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Gm24136-201ENSMUST00000083374 165 ntBASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb3Q9ERD7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Gm15236-201ENSMUST00000117309 379 ntBASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms