Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Gm16296-201ENSMUST00000159905 325 ntBASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ssr3Q9DCF9 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Gm8396-201ENSMUST00000057361 823 ntBASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.81□□□□□ -0.68
Ssr3Q9DCF9 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.8□□□□□ -0.68
Ssr3Q9DCF9 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ssr3Q9DCF9 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.8□□□□□ -0.68
Ssr3Q9DCF9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.8□□□□□ -0.68
Ssr3Q9DCF9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms