Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmg20aQ9DC33 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmg20aQ9DC33 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmg20aQ9DC33 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hmg20aQ9DC33 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.08□□□□□ -0.64
Hmg20aQ9DC33 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmg20aQ9DC33 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hmg20aQ9DC33 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Hmg20aQ9DC33 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hmg20aQ9DC33 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hmg20aQ9DC33 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hmg20aQ9DC33 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.08□□□□□ -0.64
Hmg20aQ9DC33 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hmg20aQ9DC33 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmg20aQ9DC33 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Gm11439-201ENSMUST00000118598 409 ntBASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Gm11524-201ENSMUST00000119349 807 ntBASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Gm19078-201ENSMUST00000206311 727 ntBASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.07□□□□□ -0.64
Hmg20aQ9DC33 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Gm6447-201ENSMUST00000118905 835 ntBASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hmg20aQ9DC33 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms