Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.94■□□□□ 0.14
U2af1Q9D883 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.94■□□□□ 0.14
U2af1Q9D883 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC15.94■□□□□ 0.14
U2af1Q9D883 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.94■□□□□ 0.14
U2af1Q9D883 Gm17040-202ENSMUST00000170597 889 ntBASIC15.94■□□□□ 0.14
U2af1Q9D883 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC15.94■□□□□ 0.14
U2af1Q9D883 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.94■□□□□ 0.14
U2af1Q9D883 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Gm18893-201ENSMUST00000198416 943 ntBASIC15.94■□□□□ 0.14
U2af1Q9D883 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.94■□□□□ 0.14
U2af1Q9D883 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.94■□□□□ 0.14
U2af1Q9D883 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
U2af1Q9D883 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
U2af1Q9D883 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
U2af1Q9D883 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
U2af1Q9D883 Gm27177-202ENSMUST00000183514 2703 ntBASIC15.94■□□□□ 0.14
U2af1Q9D883 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.94■□□□□ 0.14
U2af1Q9D883 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.93■□□□□ 0.14
U2af1Q9D883 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 Gm11511-201ENSMUST00000118146 540 ntBASIC15.93■□□□□ 0.14
U2af1Q9D883 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC15.93■□□□□ 0.14
U2af1Q9D883 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
U2af1Q9D883 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.93■□□□□ 0.14
U2af1Q9D883 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 Gm19208-201ENSMUST00000213861 912 ntBASIC15.93■□□□□ 0.14
U2af1Q9D883 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
U2af1Q9D883 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC15.93■□□□□ 0.14
U2af1Q9D883 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC15.93■□□□□ 0.14
U2af1Q9D883 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
U2af1Q9D883 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC15.93■□□□□ 0.14
U2af1Q9D883 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
U2af1Q9D883 CT009757.3-201ENSMUST00000223367 2320 ntBASIC15.93■□□□□ 0.14
U2af1Q9D883 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
U2af1Q9D883 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
U2af1Q9D883 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.92■□□□□ 0.14
U2af1Q9D883 Gm26286-201ENSMUST00000104166 134 ntBASIC15.92■□□□□ 0.14
U2af1Q9D883 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
U2af1Q9D883 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
U2af1Q9D883 Gm12266-201ENSMUST00000120311 962 ntBASIC15.92■□□□□ 0.14
U2af1Q9D883 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15.92■□□□□ 0.14
U2af1Q9D883 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC15.92■□□□□ 0.14
U2af1Q9D883 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.92■□□□□ 0.14
U2af1Q9D883 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.92■□□□□ 0.14
U2af1Q9D883 Gm26461-201ENSMUST00000175064 290 ntBASIC15.92■□□□□ 0.14
U2af1Q9D883 Gm5706-201ENSMUST00000181525 993 ntBASIC15.92■□□□□ 0.14
U2af1Q9D883 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.92■□□□□ 0.14
U2af1Q9D883 Gm18038-201ENSMUST00000197900 485 ntBASIC15.92■□□□□ 0.14
U2af1Q9D883 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
U2af1Q9D883 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
U2af1Q9D883 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
U2af1Q9D883 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC15.92■□□□□ 0.14
U2af1Q9D883 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC15.92■□□□□ 0.14
U2af1Q9D883 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
U2af1Q9D883 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms