Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.2□□□□□ -0.46
Trim42Q9D2H5 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim42Q9D2H5 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim42Q9D2H5 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm14363-201ENSMUST00000122304 409 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms